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The Publication List of LMDM Since 1993

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Synthetically-primed adaptation of Pseudomonas putida to a non-native substrate D-xylose. Dvořák P, Burýšková B, Popelářová B, Ebert BE, Botka T, Bujdoš D, Sánchez-Pascuala A, Schöttler H, Hayen H, De Lorenzo V, Blank LM, Benešík M. Nature Communications 2024; 15:2666, doi: 10.1038/s41467-024-46812-9.
Effect of soil depth on the structure of bacterial composition in the active layer at five geologically distinct sites on James Ross and Vega Islands in Antarctica. Micenková L, Sedláček I, Hrbáček F, Švec P, Nývlt D, Pantůček R, Mašlaňová I. Polar Biology 2024; 47(3):295-303.
Corynebacterium mendelii sp. nov., a novel bacterium isolated from Adélie penguin oral cavity. Koublová V, Sedlář K, Sedláček I, Musilová J, Staňková E, Bezdíček Králová S, Koudelková S, Krsek D, Švec P. International Journal of Systematic and Evolutionary Microbiology 2024; 74(1):006244.
High colonisation by probiotic Escherichia coli A0 34/86 strain is associated with a less diverse microbiome related to children’s age. Micenková L, Brodíková K, Smetanová S, Bosák J, Šmajs D, Andrla P, Budinská E. Beneficial Microbes 2024; 15(1):5-17.
Jorvik: a membrane-containing phage that will likely found a new family within Vinavirales. Bardy P, MacDonald CIW, Pantucek R, Antson AA, Fogg PCM. iScience 2023; 26(11):108104.
Staphylococcus brunensis sp. nov. isolated from human clinical specimens with a staphylococcal cassette chromosome-related genomic island outside of the rlmH gene bearing the ccrDE recombinase gene complex. Kovařovic V, Finstrlová A, Sedláček I, Petráš P, Švec P, Mašlaňová I, Neumann-Schaal M, Šedo O, Botka T, Staňková E, Doškař J, Pantůček R. Microbiology Spectrum 2023; 11(5):e01342-23.
Effects of Dietary Zinc and/or an Herbal Mixture on Intestinal Microbiota and Barrier Integrity in Lambs. Bujňáková D, Kucková K, Váradyová Z, Plachá I, Strompfová V, Böhm J, Micenková L, Čobanová K. Agriculture 2023; 13(9):1819.
Complete genome sequences of five Escherichia coli strains with probiotic attributes. Fedrová P, Hrala M, Tom N, Micenková L, Nascimento AMA, Bosák J, Šmajs D. Microbiol Resour Announc. 2023; 12(9):e00363-23.
Novel Antimicrobial Genetic Elements in Methicillin-Resistant Macrococcus armenti. Keller JE, Schwendener S, Nováková D, Pantůček R, Perreten V. Microbial Drug Resistance 2023; 29(2):65-68.
Staphylococcus aureus prophage-encoded protein causes abortive infection and provides population immunity against Kayviruses. Kuntová L, Mašlaňová I, Obořilová R, Šimečková H, Finstrlová A, Bárdy P, Šiborová M, Troianovska L, Botka T, Gintar P, Šedo O, Farka Z, Doškař J, Pantůček R. mBio 2023; 14(2):e02490-22.
Capillary electrophoretic methods for classification of methicillin-resistant Staphylococcus aureus (MRSA) clones. Horká M, Růžička F, Siváková A, Karásek P, Šalplachta J, Pantůček R, Roth M. Analytica Chimica Acta 2022; 1227:340305.
Global Transcriptomic Analysis of Bacteriophage-Host Interactions between a Kayvirus Therapeutic Phage and Staphylococcus aureus. Finstrlová A, Mašlaňová I, Blasdel Reuter BG, Doškař J, Götz F, Pantůček R. Microbiology Spectrum 2022; 10(3):e00123-22.
Staphylococcus ratti sp. nov. isolated from a lab rat. Kovařovic V, Sedláček I, Petráš P, Králová S, Mašlaňová I, Švec P, Neumann-Schaal M, Botka T, Gelbíčová T, Staňková E, Doškař J, Pantůček R. Pathogens 2022; 11(1):51.
Atomic force microscopy and surface plasmon resonance for real-time single-cell monitoring of bacteriophage-mediated lysis of bacteria. Obořilová R, Šimečková H, Pastucha M, Klimovič Š, Víšová I, Přibyl J, Vaisocherová-Lísalová H, Pantůček R, Skládal P, Mašlaňová I, Farka Z. Nanoscale 2021; 13(31):13538-13549.
Staphylococcus epidermidis phages transduce antimicrobial resistance plasmids and mobilize chromosomal islands. Fišarová L, Botka T, Du X, Mašlaňová I, Bárdy P, Pantůček R, Benešík M, Roudnický P, Winstel V, Larsen J, Rosenstein R, Peschel A, Doškař J. mSphere 2021; 6(3):e00223-21.
Bacteriophage replication on permissive host cells in fused silica capillary with nanostructured part as potential of electrophoretic methods for developing phage applications. Horká M, Karásek P, Roth M, Štveráková D, Šalplachta J, Růžička F, Pantůček R. Talanta 2021; 224(1):121800.
Hymenobacter terrestris sp. nov. and Hymenobacter lapidiphilus sp. nov., isolated from regoliths in Antarctica. Sedláček I, Pantůček R, Zeman M, Holochová P, Šedo O, Staňková E, Švec P, Králová S, Vídeňská P, Micenková L, Urvashi, Korpole S, Lal R. International Journal of Systematic and Evolutionary Microbiology 2020; 70(12): 6364-6372.
Rapid isolation, propagation and on-line analysis of low number of therapeutic staphylococcal bacteriophages from a complex matrix. Horká M, Šalplachta J, Karasek P, Růžička F, Stverakova D, Pantucek R, Roth M. ACS Infect. Dis. 2020; 6(10): 2745–2755.
Enzybiotics LYSSTAPH-S and LYSDERM-S as potential therapeutic agents for chronic MRSA wound infections. Vacek L, Kobzová Š, Čmelík R, Pantůček R, Janda L. Antibiotics (Basel) 2020; 9(8):519.
Analysis of bacteriophage-host interaction by Raman tweezers. Pilát Z, Jonáš A, Pilátová J, Klementová T, Bernatová S, Šiler M, Maňka T, Kizovský M, Růžička F, Pantůček R, Neugebauer U, Samek O, Zemánek P. Anal. Chem. 2020; 92(18):12304–12311.
Description of Massilia rubra sp. nov., Massilia aquatica sp. nov., Massilia mucilaginosa sp. nov., Massilia frigida sp. nov., and one Massilia genomospecies isolated from Antarctic streams, lakes and regoliths. Holochová P, Mašlaňová I, Sedláček I, Švec P, Králová S, Kovařovic V, Busse H-J, Staňková E, Barták M, Pantůček R. Syst Appl Microbiol. 2020; 43(5):126112.
SH3 binding domains from phage endolysins: How to use them for detection of Gram-positive pathogens. Jarábková V, Tišáková L, Benešík M, Godány A. J Microbiol Biotech Food Sci 2020; 9(6):1211-1214.
Structure and mechanism of DNA delivery of a gene transfer agent. Bárdy P, Füzik T, Hrebík D, Pantůček R, Beatty JT, Plevka P. Nature Communications 2020; 11:3034, doi: 10.1038/s41467-020-16669-9.
Therapeutic potential of bacteriophages for staphylococcal infections and selected methods for in vitro susceptibility testing of staphylococci. Dvořáčková M, Růžička F, Dvořáková Heroldová M, Vacek L, Bezděková D, Benešík M, Petráš P, Pantůček R. Epidemiologie Mikrobiologie Imunologie 2020; 69(1): 10-18.
Nano-etched fused silica capillary used for on-line preconcentration and electrophoretic separation of bacteriophages from large blood sample volumes with off-line MALDI-TOF mass spectrometry identification. Horká M, Karásek P, Šalplachta J, Růžička F, Štveráková D, Pantůček R, Roth M. Microchimica Acta 2020; 187(3):177, doi: 10.1007/s00604-020-4154-6.
Characterization of Staphylococcus intermedius group isolates associated with animals from Antarctica and emended description of Staphylococcus delphini. Vrbovská V, Sedláček I, Zeman M, Švec P, Kovařovic, V, Šedo O, Laichmanová M, Doškař J, Pantůček R. Microorganisms 2020; 8(2):204, doi:10.3390/microorganisms8020204.
Pseudomonas leptonychotis sp. nov., isolated from Weddell seals in Antarctica. Nováková D, Švec P, Zeman M, Busse H-J, Mašlaňová I, Pantůček R, Králová S, Krištofová L, Sedláček I. International Journal of Systematic and Evolutionary Microbiology 2020; 70(1):302-308.
New genus Fibralongavirus in Siphoviridae phages of Staphylococcus pseudintermedius. Zeman M, Bárdy P, Vrbovská V, Roudnický P, Zdráhal Z, Růžičková V, Doškař J, Pantůček R. Viruses 2019; 11(12):1143, DOI: 10.3390/v11121143.
Draft genome sequence of Panton-Valentine leucocidin producing Staphylococcus aureus strain NRL 08/001 sequence type 154 from a fatal case of necrotizing pneumonia. Indraková A, Mašlaňová I, Mrkva O, Bendíčková K, Vrbovská V, Doškař J, Pantůček R. Microbiology Resource Announcements 2019; 8(47):e01299-19.
Structure and genome ejection mechanism of Staphylococcus aureus phage P68. Hrebík D, Štveráková D, Škubník K, Füzik T, Pantůček R, Plevka P. Science Advances 2019; 5(10):eaaw7414.
Staphylococcus petrasii diagnostics and its pathogenic potential enhanced by mobile genetic elements. Vrbovská V, Kovařovic V, Mašlaňová I, Indráková A, Petráš P, Šedo O, Švec P, Fišarová L, Šiborová M, Mikulášek K, Sedláček I, Doškař J, Pantůček R. International Journal of Medical Microbiology 2019; 309(8):151355.
Hymenobacter humicola sp. nov., isolated from soils in Antarctica. Sedláček I, Pantůček R, Holochová P, Králová S, Staňková E, Šedo O, Švec P, Busse H-J. International Journal of Systematic and Evolutionary Microbiology 2019; 69(9):2755-2761.
Lytic and genomic properties of spontaneous host-range Kayvirus mutants prove their suitability for upgrading phage therapeutics against staphylococci. Botka T, Pantůček R, Mašlaňová I, Benešík M, Petráš P, Růžičková V, Havlíčková P, Varga M, Žemličková H, Koláčková I, Florianová M, Jakubů V, Karpíšková R, Doškař J. Scientific Reports 2019; 9:e5475, doi: 10.1038/s41598-019-41868-w.
Future prospects of structural studies to advance our understanding of phage biology. Bárdy P, Hrebík D, Pantůček R, Plevka P. Microbiology Australia 2019; 40(1):42-46, doi: 10.1071/MA19009.
Flavobacterium circumlabens sp. nov. and Flavobacterium cupreum sp. nov., two psychrotrophic species isolated from Antarctic environmental samples. Králová S, Busse H-J, Švec P, Mašlaňová I, Staňková E, Barták M, Sedláček I. Systematic and Applied Microbiology 2019; 42(3):291-301.
Hymenobacter amundsenii sp. nov. resistant to ultraviolet radiation, isolated from regoliths in Antarctica. Sedláček I, Pantůček R, Králová S, Mašlaňová I, Holochová P, Staňková E, Vrbovská V, Švec P, Busse H-J. Systematic and Applied Microbiology 2019; 42(3):284-290.
Variability of resistance plasmids in coagulase-negative staphylococci and their importance as a reservoir of antimicrobial resistance. Fišarová L, Pantůček R, Botka T, Doškař J. Research in Microbiology 2019; 170(2):105-111.
Antimicrobial effect of commercial phage preparation Stafal® on biofilm and planktonic forms of methicillin-resistant Staphylococcus aureus. Dvořáčková M, Růžička F, Benešík M, Pantůček R, Dvořáková Heroldová M. Folia Microbiol. 2019; 64(1):121–126.
Electrophoretic techniques for purification, separation and detection of Kayvirus with subsequent control by matrix-assisted laser desorption/ionization time-of-flight mass spectrometry and microbiological methods. Horká M, Štveráková D, Šalplachta J, Šlais K, Šiborová M, Růžička F, Pantůček R. Journal of Chromatography A 2018; 1570: 155–163.
Description and comparative genomics of Macrococcus caseolyticus subsp. hominis subsp. nov., Macrococcus goetzii sp. nov., Macrococcus epidermidis sp. nov., and Macrococcus bohemicus sp. nov., novel macrococci from human clinical material with virulence potential and suspected uptake of foreign DNA by natural transformation. Mašlaňová I, Wertheimer Z, Sedláček I, Švec P, Indráková A, Kovařovic V, Schumann P, Spröer C, Králová S, Šedo O, Krištofová L, Vrbovská V, Füzik T, Petráš P, Zdráhal Z, Růžičková V, Doškař J, Pantůček R. Front. Microbiol. 2018; 9:1178, doi:10.3389/fmicb.2018.01178.
Silk route to the acceptance and re-implementation of bacteriophage therapy – Part II. Sybesma W, Rohde C, Bárdy P, Pirnay J-P, Cooper I, Caplin J, Chanishvili N, Coffey A, de Vos D, Scholz A, McCallin S, Pueshner H, Pantůček R, Aminov R, Doškař J, Kurtböke İ. Antibiotics (Basel) 2018; 7(2):e35, doi:10.3390/antibiotics7020035.
Expert opinion on three phage therapy related topics: bacterial phage resistance, phage training and prophages in bacterial production strains. Rohde C, Resch G, Pirnay J-P, Blasdel BG, Debarbieux L, Gelman D, Górski A, Hazan R, Huys I, Kakabadze E, Łobocka M, Maestri A, Magno de Freitas Almeida G, Makalatia K, Malik DJ, Mašlaňová I, Merabishvili M, Pantucek R, Rose T, Štveráková D, Van Raemdonck H, Verbeken G, Chanishvili N. Viruses (Basel) 2018; 10(4):e178, doi:10.3390/v10040178.
Rapid identification of intact staphylococcal bacteriophages using matrix-assisted laser desorption ionization-time-of-flight mass spectrometry. Štveráková D, Šedo O, Benešík M, Zdráhal Z, Doškař J, Pantůček R. Viruses (Basel) 2018; 10(4):e176, doi:10.3390/v10040176.
Complete genome sequence of the type strain of Macrococcus canis. Gobeli Brawand S, Rychener L, Schwendener S, Pantůček R, Perreten V. Genome Announc. 2018; 6:e01507-17, doi:10.1128/genomeA.01507-17.
Staphylococcus edaphicus sp. nov., isolated in Antarctica, harbours mecC gene and genomic islands with a suspected role in adaptation to extreme environments. Pantůček R, Sedláček I, Indráková A, Vrbovská V, Mašlaňová I, Kovařovic V, Švec P, Králová S, Krištofová L, Kekláková J, Petráš P, Doškař J. Applied and Environmental Microbiology 2018; 84(2):e01746-17, doi:10.1128/AEM.01746-17.
Role of SH3b binding domain in a natural deletion mutant of Kayvirus endolysin LysF1 with a broad range of lytic activity. Benešík M, Nováček J, Janda L, Dopitová R, Pernisová M, Melková K, Tišáková L, Doškař J, Žídek L, Hejátko J, Pantůček R. Virus Genes 2018; 54(1):130-139.
Mucilaginibacter terrae sp. nov., isolated from Antarctic soil. Sedláček I, Pantůček R, Králová S, Mašlaňová I, Holochová P, Staňková E, Sobotka R, Barták M, Busse H-J, Švec P. International Journal of Systematic and Evolutionary Microbiology 2017; 67(10):4002-4007.
Two highly divergent lineages of exfoliative toxin B-encoding plasmids revealed in impetigo strains of Staphylococcus aureus. Botka T, Růžičková V, Svobodová K, Pantůček R, Petráš P, Čejková D, Doškař J. International Journal of Medical Microbiology 2017; 307(6):291-296.
Staphylococcus sciuri bacteriophages double-convert for staphylokinase and phospholipase, mediate interspecies plasmid transduction, and package mecA gene. Zeman M, Mašlaňová I, Indráková A, Šiborová M, Mikulášek K, Bendíčková K, Plevka P, Vrbovská V, Zdráhal Z, Doškař J, Pantůček R. Scientific Reports 2017; 7:e46319, doi: 10.1038/srep46319.
Application of bacteriophages. Aminov R, Caplin J, Chanishvili N, Coffey A, Cooper I, De Vos D, Doškař J, Friman V-P, Kurtböke I, Pantůček R, Pirnay J-P, Resch G, Rohde C, Sybesma W, Wittmann J. Microbiology Australia 2017; 38(2):63-66.
Pedobacter psychrophilus sp. nov., isolated from Antarctic fragmentary rock. Švec P, Králová S, Busse H-J, Kleinhagauer T, Kýrová K, Pantůček R, Mašlaňová I, Staňková E, Němec M, Holochová P, Barták M, Sedláček I. International Journal of Systematic and Evolutionary Microbiology 2017; 67(8):2538-2543.
Red-pink pigmented Hymenobacter coccineus sp. nov., Hymenobacter lapidarius sp. nov., and Hymenobacter glacialis sp. nov. isolated from rocks in Antarctica. Sedláček I, Králová S, Kýrová K, Mašlaňová I, Busse H-J, Staňková E, Vrbovská V, Němec M, Barták M, Holochová P, Švec P, Pantůček R. International Journal of Systematic and Evolutionary Microbiology 2017; 67(6):1975-1983.
Pedobacter jamesrossensis sp. nov., Pedobacter lithocola sp. nov., Pedobacter mendelii sp. nov., and Pedobacter petrophilus sp. nov., isolated from Antarctic environment. Švec P, Králová S, Busse H-J, Kleinhagauer T, Pantůček R, Mašlaňová I, Cnockaert M, Vandamme P, Staňková E, Gelbíčová T, Holochová P, Barták M, Kýrová K, Sedláček I. International Journal of Systematic and Evolutionary Microbiology 2017; 67(5):1499-1507.
Characterisation of methicillin-susceptible Staphylococcus pseudintermedius isolates from canine infections and determination of virulence factors using multiplex PCR. Melter O, Švec P, Tkadlec J, Doškař J, Kinská H, Pantůček R. Veterinarni Medicina 2017; 62(2):81-89.
High intraspecies heterogeneity within Staphylococcus sciuri and rejection of its classification into S. sciuri subsp. sciuri, S. sciuri subsp. carnaticus and S. sciuri subsp. rodentium. Švec P, Petráš P, Pantůček R, Doškař J, Sedláček I. International Journal of Systematic and Evolutionary Microbiology 2016; 66(12):5181-5186.
The evolutionary pathway of the staphylococcal cassette chromosome element. Indráková A, Mašlaňová I, Kováčová V, Doškař J, Pantůček R. Biologia 2016; 71(11):1195–1203.
Efficient plasmid transduction to Staphylococcus aureus strains insensitive to the lytic action of transducing phage. Mašlaňová I, Stříbná S, Doškař J, Pantůček R. FEMS Microbiology Letters 2016; 363(19): fnw211, doi:10.1093/femsle/fnw211.
Rufibacter ruber sp. nov., isolated from Antarctic fragmentary rock. Kýrová K, Sedláček I, Pantůček R, Králová S, Holochová P, Mašlaňová I, Staňková E, Kleinhagauer T, Gelbíčová T, Sobotka R, Švec P, Busse H-J. International Journal of Systematic and Evolutionary Microbiology 2016; 66(11):4401-4405.
Structure and genome release of Twort-like Myoviridae phage with a double-layered baseplate. Nováček J, Šiborová M, Benešík M, Pantůček R, Doškař J, Plevka P. Proceedings of the National Academy of Sciences 2016; 113(33):9351–9356.
Genetically modified bacteriophages in applied microbiology. Bárdy P, Pantůček R, Benešík M, Doškař J. Journal of Applied Microbiology 2016; 121(3):618–633.
Virulence factors and resistance to antimicrobials in Listeria monocytogenes serotype 1/2c isolated from food. Gelbíčová T, Pantůček R, Karpíšková R. Journal of Applied Microbiology 2016; 121(2):569-576.
Efficient non-enzymatic cleavage of Staphylococcus aureus plasmid DNAs mediated by neodymium ions. Zovčáková M, Španová A, Pantůček R, Doškař J, Rittich B. Analytical Biochemistry 2016; 507:66-70.
Silk route to the acceptance and re-implementation of bacteriophage therapy. Expert Round Table on Acceptance and Re-implementation of Bacteriophage Therapy. Biotechnology Journal 2016; 11(5):595–600.
Aquitalea pelogenes sp. nov., isolated from mineral peloid sp. nov. Sedláček I, Kwon S-W, Švec P, Mašlaňová I, Kýrová K, Holochová P, Černohlávková J, Busse H-J. International Journal of Systematic and Evolutionary Microbiology 2016; 66(2):962-967.
Molecular characterisation of a new efficiently transducing bacteriophage identified in methicillin-resistant Staphylococcus aureus. Varga M, Pantůček R, Růžičková V, Doškař J. Journal of General Virology 2016; 97(1):258-268.
Necrotizing pneumonia due to clonally diverse Staphylococcus aureus strains producing Panton-Valentine leukocidin: the Czech experience. Rájová J, Pantůček R, Petráš P, Varbanovová I, Mašlaňová I, Beneš J. Epidemiol. Infect. 2016; 144(3):507-515.
Classification of strain CCM 4446^T as Rhodococcus degradans sp. nov. Švec P, Černohlávková J, Busse H-J, Vojtková H, Pantůček R, Cnockaert M, Mašlaňová I, Králová S, Vandamme P, Sedláček I. International Journal of Systematic and Evolutionary Microbiology 2015; 65(12):4381-4387.
Complete genome analysis of two new bacteriophages isolated from impetigo strains of Staphylococcus aureus. Botka T, Růžičková V, Konečná H, Pantůček R, Rychlík I, Zdráhal Z, Petráš P, Doškař J. Virus Genes 2015; 51(1):122-131.
A novel mutation leading to a premature stop codon in inlA of Listeria monocytogenes isolated from neonatal listeriosis. Gelbíčová T, Koláčková I, Pantůček R, Karpíšková R. New Microbiologica 2015; 38(2):293-296.
Characterization of Staphylococcus aureus strains isolated from Czech cystic fibrosis patients: high rate of ribosomal mutation conferring resistance to MLSB antibiotics as a result of long-term and low-dose azithromycin treatment. Tkadlec J, Vařeková E, Pantůček R, Doškař J, Růžičková V, Botka T, Fila L, Melter O. Microbial Drug Resistance 2015; 21(4):416-423.
Staphylococcus petrasii subsp. pragensis subsp. nov., occurring in human clinical material. Švec P, De Bel A, Sedláček I, Petráš P, Gelbíčová T, Černohlávková J, Mašlaňová I, Cnockaert M, Echahidi F, Vandamme P, Pantůček R. Int J Syst Evol Microbiol 2015; 65(7):2071-2077.
Characterization of Pseudomonas monteilii CCM 3423 and its physiological potential for biodegradation of selected organic pollutants. Vojtková H, Kosina M, Sedláček I, Mašlaňová I, Harwotová M, Molinková V. Folia Microbiologica 2015; 60(5):411-416.
Reclassification of Staphylococcus jettensis De Bel et al. 2013 as Staphylococcus petrasii subsp. jettensis subsp. nov. and emended description of Staphylococcus petrasii Pantucek et al. 2013. De Bel AV, Švec P, Petráš P, Sedláček I, Pantůček R, Echahidi F, Pierard D, Vandamme PA. Int J Syst Evol Microbiol 2014; 64(12):4198-4201.
The Staphylococcal Cassette Chromosome mec type V from Staphylococcus aureus ST398 is packaged into bacteriophage capsids. Chlebowicz MA, Mašlaňová I, Kuntová L, Grundmann H, Pantůček R, Doškař J, van Dijl JM, Buist G. International Journal of Medical Microbiology 2014; 304(5-6):764-774.
Staphylococcus aureus in Czech cystic fibrosis patients – prospective study. Tkadlec J, Melter O, Bukáčková E, Fila L, Pantůček R, Indráková A, Botka T, Růžičková V. Journal of Cystic Fibrosis 2014; 13(S2):S70.
Relapsing endocarditis caused by Enterococcus faecalis forming small colony variants. Beneš J, Džupová O, Setina M, Feuereisl R, Švec P, Pantůček R. Scandinavian Journal of Infectious Diseases 2013; 45(10):800-803.
Pollutant interactions during the biodegradation of phenolic mixtures with either 2- or 3-mononitrophenol in a continuously operated packed bed reactor. Halecký M, Páca J, Stiborová M, Kozliak EI, Mašlaňová I. J Environ Sci Health A Tox Hazard Subst Environ Eng 2013; 48(13):1609-1618.
Pseudomonas prosekii sp. nov., a novel psychrotrophic bacterium from Antarctica. Kosina M, Barták M, Mašlaňová I, Vávrová Pascutti A, Šedo O, Lexa M, Sedláček I. Current Microbiology 2013; 67(6):637-646.
Description of Pseudomonas jessenii subsp. pseudoputida subsp. nov., amended description of Pseudomonas jessenii and description of Pseudomonas jessenii subsp. jessenii subsp. nov. Kosina M, Mašlaňová I, Vávrová Pascutti A, Šedo O, Lexa M, Švec P, Sedláček I. Folia Microbiol 2013; 58(6):631-639.
Enterococcus alcedinis sp. nov., isolated from common kingfisher (Alcedo atthis). Frolková P, Švec P, Sedláček I, Mašlanová I, Černohlávková J, Ghosh A, Zurek L, Radimerský T, Literák I. Int J Syst Evol Microbiol 2013; 63(8):3069-3074.
Staphylococcus petrasii sp. nov. including S. petrasii subsp. petrasii subsp. nov. and S. petrasii subsp. croceilyticus subsp. nov., isolated from human clinical specimens and human ear infections. Pantůček R, Švec P, Dajcs JJ, Machová I, Černohlávková J, Šedo O, Gelbíčová T, Mašlaňová I, Doškař J, Zdráhal Z, Růžičková V, Sedláček I. Syst Appl Microbiol 2013; 36(2):90-95.
Bacteriophages of Staphylococcus aureus efficiently package various bacterial genes and mobile genetic elements including SCCmec with different frequencies. Mašlaňová I, Doškař J, Varga M, Kuntová L, Mužík J, Malúšková D, Růžičková V, Pantůček R. Env Microbiol Reports 2013; 5(1):66-73.
Enterococcus ureilyticus sp. nov. and Enterococcus rotai sp. nov., two novel urease producing enterococci from the environment. Sedláček I, Holochová P, Mašlaňová I, Kosina M, Spröer C, Bryndová H, Vandamme P, Rudolf I, Hubálek Z, Švec P. Int J Syst Evol Microbiol 2013; 63(2):502-510.
Major clonal lineages in impetigo Staphylococcus aureus strains isolated in Czech and Slovak maternity hospitals. Růžičková V, Pantůček R, Petráš P, Machová I, Kostýlková K, Doškař J. Int J Med Microbiol 2012; 302(6):237-241.
Efficient transfer of antibiotic resistance plasmids by transduction within methicillin-resistant Staphylococcus aureus USA300 clone. Varga M, Kuntová L, Pantůček R, Mašlaňová I, Růžičková V, Doškař J. FEMS Microbiol Lett 2012; 332(2):146-152.
Characteristics and distribution of plasmids in a clonally diverse set of methicillin-resistant Staphylococcus aureus strains. Kuntová L, Pantůček R, Rájová J, Růžičková V, Petráš P, Mašlaňová I, Doškař J. Arch Microbiol 2012; 194(7):607-614.
Enterococcus plantarum sp. nov., isolated from plants. Švec P, Vandamme P, Bryndová H, Holochová P, Kosina M, Mašlaňová I, Sedláček I. Int J Syst Evol Microbiol 2012; 62(7):1499-1505.
Removal of heavy metals from wastewater by a Rhodococcus sp. bacterial strain. Vojtková H, Mašlaňová I, Sedláček I, Švanová P., Janulková R. Surveying Geology & mining Ecology Management SGEM2012 Conference Proceedings. ISSN 1314-2704; 5:685-692.
Multilocus PCR typing strategy for differentiation of Staphylococcus aureus siphoviruses reflecting their modular genome structure. Kahánková J, Pantůček R, Goerke C, Růžičková V, Holochová P, Doškař J. Environ Microbiol 2010; 12(9):2527-2538.
Genomic diversity of two lineages of exfoliative toxin A-converting phages predominating in Staphylococcus aureus strains in the Czech Republic. Holochová P, Růžičková V, Pantůček R, Petráš P, Janisch R, Doškař J. Res Microbiol 2010; 161(4):260-267.
Proteomics uncovers extreme heterogeneity in the Staphylococcus aureus exoproteome due to genomic plasticity and variant gene regulation. Ziebandt AK, Kusch H, Degner M, Jaglitz S, Sibbald MJ, Arends JP, Chlebowicz MA, Albrecht D, Pantůček R, Doškař J, Ziebuhr W, Bröker BM, Hecker M, van Dijl JM, Engelmann S. Proteomics 2010; 10(8):1634-1644.
Identification of Staphylococcus spp. using (GTG)₅-PCR fingerprinting. Švec P, Pantůček R, Petráš P, Sedláček I, Nováková D. Syst Appl Microbiol 2010; 33(8):451-456.
The use of molecular genetics techniques in clinical microbiology–final report from the workshop of the Molecular Microbiology Working Group TIDE. Hrabák J, Bunček M, Dendis M, Horváth R, Chroňáková A, Libra A, Nešvera J, Pantůček R, Piskunová N, Plíšková L, Růžička F, Sauer P, Sedláček I, Trubač P, Žampachová E, Žemlicková H, Scharfen J, Molecular Microbiology Working Group TIDE. Epidemiol Mikrobiol Imunol 2010; 59(3): 103-106.
Rapid detection and differentiation of the exfoliative toxin A-producing Staphylococcus aureus strains based on phiETA prophage polymorphisms. Holochová P, Růžičková V, Dostálová L, Pantůček R, Petráš P, Doškař J. Diagn Microbiol Infect Dis 2010; 66(3): 248-252.
Staphylococcus microti sp. nov., isolated from the common vole (Microtus arvalis). Nováková D, Pantůček R, Hubálek Z, Falsen E, Busse H-J, Schumann P, Sedláček I. Int J Syst Evol Microbiol 2010; 60(3): 566-573.
Septic shock in fatal pneumonia caused by Staphylococcus aureus: The significance of producing Pantone-Valentine leukocidine – Case report.
Beneš J, Myslivec O, Laštíková J, Gabrielová A, Petráš P, Pantůček R. Anesteziol Intenziv Med 2010; 21(6): 337-341.
Molecular Diagnostics of Staphylococcus aureus. Doškař J, Pantůček R, Růžičková V, Sedláček I. In: M.V. Magni (Ed.) Detection of Bacteria, Viruses, Parasites and Fungi. Bioterrorism Prevention, pp. 139-184. Proceedings of the NATO Advanced Research Workshop on Detection of Bacteria, Viruses, Parasites and Fungi,. Perugia, Italy November 18-21, 2008. Series: NATO Science for Peace and Security Series; Subseries: NATO Science for Peace and Security Series A: Chemistry and Biology. Springer 2010, VII, 510 p., ISBN: 978-90-481-8543-6.
Characteristics of Panton-Valentine leukocidin positive Staphylococcus aureus strains isolated from abscessing pneumonias in the Czech Republic. Machová I, Kahánková J, Fridrichová M, Kuntová L, Dvořáková M, Doškař J, Žemličková H, Pantůček R, Petráš P. Clin Microbiol Infect 2010, 16(s2): S504.
Diversity of prophages in dominant Staphylococcus aureus clonal lineages. Goerke C, Pantůček R, Holtfreter S, Schulte B, Zink M, Grumann D, Bröker BM, Doškař J, Wolz C. J Bacteriol 2009; 191(11):3462-3468.
Extraction of PCR-ready DNA from Staphylococcus aureus bacteriophages using carboxyl functionalized magnetic nonporous microspheres. Kahánková J, Španová A, Pantůček R, Horák D, Doškař J, Rittich B. J Chromatogr B 2009; 877(7):599-602.
Genotype analysis of enterotoxin H-positive Staphylococcus aureus strains isolated from food samples in the Czech Republic. Růžičková V, Karpíšková R, Pantůček R, Pospíšilová M, Černíková P, Doškař J. Int J Food Microbiol 2008; 121(1):60-65.
Bakteriofágy a fágové lytické enzymy: naděje v léčbě bakteriálních infekcí. Eyer L. Universitas - revue Masarykovy univerzity 2008; 6(4):21-29.
New perspectives of the phage therapy. Eyer L, Pantůček R, Růžičková V, Doškař J. Klin Mikrobiol Infekc Lek 2007; 13(6):231-235.
Genome rearrangements in host-range mutants of the polyvalent staphylococcal bacteriophage 812. Kašpárek P, Pantůček R, Kahánková J, Růžičková V, Doškař J. Folia Microbiol 2007; 52(4):331-338.
Structural protein analysis of the polyvalent staphylococcal bacteriophage 812. Eyer L, Pantůček R, Zdráhal Z, Konečná H, Kašpárek P, Růžičková V, Hernychová L, Preisler J, Doškař J. Proteomics 2007; 7(1):64-72.
Bakterie Staphylococcus jako častý zdroj nebezpečí pro člověka. Pantůček R. Universitas - revue Masarykovy univerzity 2007; 5(2):17-29.
Occurance of Staphylococcus nepalensis strains in different sources including human clinical material. Nováková D, Pantůček R, Petráš P, Koukalová D, Sedláček I. FEMS Microbiol Lett 2006; 263(2):163-168.
Staphylococcus equorum and Staphylococcus succinus isolated from human clinical specimens. Nováková D, Sedláček I, Pantůček R, Stetina V, Švec P, Petráš P. J Med Microbiol 2006; 55(5):523-528.
Genotypic characterization of toxic shock syndrome toxin-1-producing strains of Staphylococcus aureus isolated in the Czech Republic. Hrstka R, Růžičková V, Petráš P, Pantůček R, Rosypal S, Doškař J. Int J Med Microbiol 2006; 296(1):49-54.
Genotypic characterisation of vancomycin-resistant Enterococcus faecium isolates from haemato-oncological patients at Olomouc University Hospital, Czech Republic. Kolář M, Pantůček R, Vágnerová I, Kesselová M, Sauer P, Matoušková I, Doškař J, Koukalová D, Hejnar P. Clin Microbiol Infect 2006; 12(4):353-360.
Prevalence of vancomycin-resistant enterococci in hospitalized patients and those living in the community in the Czech Republic. Kolář M, Pantůček R, Vágnerová I, Sauer P, Kesselová M, Čekanová L, Koukalová D, Doškař J, Růžičková V. New Microbiol 2006; 29(2):121-125.
Characterization of Panton-Valentine leukocidin positive Staphylococcus aureus strains isolated in the Czech Republic. Petráš P, Machová I, Marejková M, Pantůček R, Růžičková V, Doškař J. Clin Microbiol Infect 2006, 12(s4): P1167.
Multiplex PCR for detection of three exfoliative toxin serotype genes in Staphylococcus aureus. Růžičková V, Voller J, Pantůček R, Petráš P, Doškař J. Folia Microbiol 2005; 50(6):499-502.
Characterization of bacteriophage 812 proteome. Zdráhal Z, Eyer L, Konečná H, Preisler J. Chemicke Listy 2005; 99(12):962-966.
Occurrence of vancomycin-resistant enterococci in humans and animals in the Czech Republic between 2002 and 2004. Kolář M, Pantůček R, Bardoň J, Čekanová L, Kesselová M, Sauer P, Vágnerová I, Koukalová D. J Med Microbiol 2005; 54(10):965-967.
Staphylococcus simiae sp. nov., isolated from South American squirrel monkeys. Pantůček R, Sedláček I, Petráš P, Koukalová D, Švec P, Štětina V, Vancanneyt M, Chrastinová L, Vokurková J, Růžičková V, Doškař J, Swings J, Hájek V. Int J Syst Evol Microbiol 2005; 55(5):1953-1958.
In vitro testing of vancomycin - gentamicin loaded bone cement to prevent prosthetic joint infection. Gallo J, Kolář M, Florschütz AV, Novotný R, Pantůček R, Kesselová M. Biomedical Papers 2005; 149(1): 153-158.
Prevalence of vancomycin-resistant enterococci in hospital and community environment. Kolář M, Pantůček R, Vágnerová I, Čekanová L, Kesselová M, Sauer P, Koukalová D, Kolář V, Růžičková V, Doškař J. Klin Mikrobiol Infekc Lek 2005; 11(2):47-50.
Identification of bacteriophage types and their carriage in Staphylococcus aureus. Pantůček R, Doškař J, Růžičková V, Kašpárek P, Oráčová E, Kvardová V, Rosypal S. Arch Virol 2004; 149(9):1689-1703.
Molecular diagnostics of clinically important staphylococci. Štěpán J, Pantůček R, Doškař J. Folia Microbiol 2004; 49(4):353-386.
Genomové ostrovy patogenity u bakterií. Růžičková V. Biologické listy (Praha) 2004; 69(1):1-14.
Macrococcus brunensis sp. nov., Macrococcus hajekii sp. nov. and Macrococcus lamae sp. nov., from the skin of llamas. Mannerová S, Pantůček R, Doškař J, Švec P, Snauwaert C, Vancanneyt M, Swings J, Sedláček I. Int J Syst Evol Microbiol 2003; 53(5):1647-1654.
Molecular typing of exfoliative toxin-producing Staphylococcus aureus strains involved in epidermolytic infections. Růžičková V, Pantůček R, Petráš P, Doškař J, Sedláček I, Rosypal S. Int J Med Microbiol 2003; 292(7-8):541-545.
Molecular-biology analysis of Enterococcus faecium vanA strains in hemato–oncological patients. Kolář M, Pantůček R, Vágnerová I, Kesselová M, Sauer P, Matoušková I, Růžičková V, Doškař J. Klin Mikrobiol Infekc Lek 2003; 9(6):284-288.
Characterization of yellow-pigmented and motile enterococci isolated from intestines of the garden snail Helix aspersa. Švec P, Devriese LA, Sedláček I, Baele M, Vancanneyt M, Haesebrouck F, Swings J, Doškař J. J Appl Microbiol 2002; 92(5):951-957.
Comparison of MRSA-Screen latex agglutination, conventional phenotypic methods and mecA gene detection for identification of oxacillin resistance in staphylococci. Hájek V, Pantůček R, Kolář M, Doškař J, Rosypal S. Biologia 2002; 57(6):729-738.
Occurrence of antibiotic-resistant bacterial strains isolated in poultry. Kolář M, Pantůček R, Bardoň J, Vágnerová I, Typovská H, Válka I, Doškař J. Vet Med Czech 2002; 47(2-3):52-59.
Identification of Staphylococcus aureus based on PCR amplification of species specific genomic 826 bp sequence derived from a common 44-kb SmaI restriction fragment. Štěpán J, Pantůček R, Růžičková V, Rosypal S, Hájek V, Doškař J. Mol Cell Probes 2001; 15(5):249-257.
Evaluation of ribotyping for characterization and identification of Enterococcus haemoperoxidus and Enterococcus moraviensis strains. Švec P, Sedláček I, Pantůček R, Devriese LA, Doškař J. FEMS Microbiol Lett 2001; 203(1):23-27.
Enterococcus haemoperoxidus sp. nov. and Enterococcus moraviensis sp. nov., isolated from water.
Švec P, Devriese LA, Sedláček I, Baele M, Vancanneyt M, Haesebrouck F, Swings J, Doškař J. Int J Syst Evol Microbiol 2001;v51(4):1567-1574.
Bakterie a jejich viry. Doškař J. Živa - časopis pro biologickou práci, Praha, Academia 2001; 49(3):101-104.
Genomic relatedness of Staphylococcus aureus phages of the International Typing Set and detection of serogroup A, B, and F prophages in lysogenic strains.
Doškař J, Pallová P, Pantůček R, Rosypal S, Růžičková V, Pantůcková P, Kailerová J, Klepárník K, Malá Z, Boček P. Can J Microbiol 2000; 46(11):1066-1076.
Complex genomic and phenotypic characterization of the related species Staphylococcus carnosus and Staphylococcus piscifermentans. Pantůček R, Sedláček I, Doškař J, Rosypal S. Int J Syst Bacteriol 1999; 49(3):941-951.
The polyvalent staphylococcal phage phi 812: its host-range mutants and related phages. Pantůček R, Rosypalová A, Doškař J, Kailerová J, Růžičková V, Borecká P, Snopková S, Horváth R, Götz F, Rosypal S. Virology 1998; 246(2):241-252.
DNA cycle sequencing of a common restriction fragment of Staphylococcus aureus bacteriophages by capillary electrophoresis using replaceable linear polyacrylamide. Klepárnik K, Berka J, Foret F, Doškař J, Kailerová J, Rosypal S, Boček P. Electrophoresis 1998; 19(5):695-700.
Physical and genetic map of the genome of Staphylococcus carnosus TM300. Wagner E, Doškař J, Götz F. Microbiology 1998; 144 (2):509-517.
Localization of prophages of serological group B and F on restriction fragments defined in the restriction map of Staphylococcus aureus NCTC 8325. Borecká P, Rosypal S, Pantůček R, Doškař J. FEMS Microbiol Lett 1996; 143(2-3):203-210.
Genomic variability of Staphylococcus aureus and the other coagulase-positive Staphylococcus species estimated by macrorestriction analysis using pulsed-field gel electrophoresis. Pantůček R, Götz F, Doškař J, Rosypal S. Int J Syst Bacteriol 1996; 46(1):216-222.
Influence of prophages in Staphylococcus aureus genome upon the length polymorphism (RFLP) of restriction fragments separated by pulsed field electrophoresis. Borecká P, Rosypal S, Doškař J, Pantůček R. Folia Biologica 1996; 42(3):117.
An improvement of restriction analysis of bacteriophage DNA using capillary electrophoresis in agarose solution. Klepárník K, Malá Z, Doškař J, Rosypal S, Boček P. Electrophoresis 1995; 16(3):366-376.
Pulsed-field gel electrophoresis of the genomic restriction fragments of coagulase-negative staphylococci. Snopková Š, Götz F, Doškař J, Rosypal S. FEMS Microbiol Lett 1994; 124(2):131-139.
Molecular analysis of the genome of staphylococcal phages. Rosypal S, Doškař J, Rosypalová A. Folia Microbiol 1993; 38(2):127.